The detailed information of tRNA gene sequence


Sequence ID>WENV170974004
Genome IDMTKY01052787
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 22642
End posion on genome 22567
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctaaagttt
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGCGTTCGAGT
CGCTCCTCCCGTGCAA
Downstream region at tRNA end position 
ctcagtgaat
Secondary structure (Cloverleaf model)
>WENV170974004	Trp	CCA
                   t      GCAA ctcagtgaat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C G C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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