The detailed information of tRNA gene sequence


Sequence ID>WENV170974051
Genome IDMTKY01053335
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12277
End posion on genome 12184
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tggaaaacgt
tRNA gene sequence 
GGAGGTGGAAGGGGCCCGGTGGCTCCTGCGGTCTTCAAAACCGTCATGCCGCCTGACCGC
GGCAGGTGGGTTCGACTCCCATGCGCCTCCGCCA
Downstream region at tRNA end position 
tatttcaccc
Secondary structure (Cloverleaf model)
>WENV170974051	SeC(p)	TCA
                   t      GCCA tatttcaccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    G       G G G G       G T G G G     C
    G       | + | |                 T T
    T       C T C C
      G G          T     CATGCCGCCTGACCGCGGCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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