The detailed information of tRNA gene sequence


Sequence ID>WENV170974053
Genome IDMTKY01053355
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 39620
End posion on genome 39695
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tgccctgagt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGGAGAGCGGAACGTTCGCAATGTTCAGGCCAGGGGTTCGAAT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
ctccttttcc
Secondary structure (Cloverleaf model)
>WENV170974053	Ala	CGC
                   t      ACCA ctccttttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    G - C
                    A - T
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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