The detailed information of tRNA gene sequence


Sequence ID>WENV170974062
Genome IDMTKY01053490
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4322
End posion on genome 4413
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caggccatgc
tRNA gene sequence 
GGAGACGTGGGTGAGTGGCTGAAACCAACGGTTTGCTAAACCGTCGTGCTGTGAATGCGG
CACCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
atttttcgtt
Secondary structure (Cloverleaf model)
>WENV170974062	Ser	GCT
                   c      GCCA atttttcgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCTGTGAATGCGGCACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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