The detailed information of tRNA gene sequence


Sequence ID>WENV170974084
Genome IDMTKY01053784
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3028
End posion on genome 2939
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gatgggaacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCTATCGCGGCGGTCTTGAAAACCGCTTCGGCTTAACCGCCG
ACGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ggacatgata
Secondary structure (Cloverleaf model)
>WENV170974084	Ser	TGA
                   c      GCCA ggacatgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C T A        G     TTCGGCTTAACCGCCGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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