The detailed information of tRNA gene sequence


Sequence ID>WENV170974094
Genome IDMTKY01053959
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13735
End posion on genome 13811
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaagcacac
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttctttgtcc
Secondary structure (Cloverleaf model)
>WENV170974094	Asp	GTC
                   c      GCCA ttctttgtcc
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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