The detailed information of tRNA gene sequence


Sequence ID>WENV170974109
Genome IDMTKY01054236
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 184
End posion on genome 109
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agaaagtatt
tRNA gene sequence 
GGCCCCATCGACTAGTGGTCTAGGTCGTAACCCTCTCAAGGTTAAAACACGGGTTCGAAT
CCCGTTGGGGCTACCA
Downstream region at tRNA end position 
attttttccg
Secondary structure (Cloverleaf model)
>WENV170974109	Glu	CTC
                   t      ACCA attttttccg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C A G       A C G G G     C
    G       + | | |                 T T
    T       G G T C
      C T A        G     AAAC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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