The detailed information of tRNA gene sequence


Sequence ID>WENV170974114
Genome IDMTKY01054275
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1295
End posion on genome 1222
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgttcgttgc
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCGTCTCTGATAAGGACGAGGTCCGTGGTTCGAA
TCCACGATCGCCCAtag
Downstream region at tRNA end position 
agcaaggcat
Secondary structure (Cloverleaf model)
>WENV170974114	Ile	GAT
                   c      Atag agcaaggcat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     G C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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