The detailed information of tRNA gene sequence


Sequence ID>WENV170974122
Genome IDMTKY01054374
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6915
End posion on genome 6990
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcgattgagt
tRNA gene sequence 
GGCGGGGTAGCTCAGTGGTTAGAGCACGCGGTTCATACCCGCGTTGTCGGGGGTTCAAAT
CCCTCCCCCGCTACCA
Downstream region at tRNA end position 
gatatcctca
Secondary structure (Cloverleaf model)
>WENV170974122	Met	CAT
                   t      ACCA gatatcctca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TTGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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