The detailed information of tRNA gene sequence


Sequence ID>WENV170974125
Genome IDMTKY01054400
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2854
End posion on genome 2779
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtgttacac
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAACGGTCTCCAAAACCGTAGGTTGCGGGTTCGATT
CCTGCCTGGCCTGCCT
Downstream region at tRNA end position 
gatgggagga
Secondary structure (Cloverleaf model)
>WENV170974125	Trp	CCA
                   c      GCCT gatgggagga
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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