The detailed information of tRNA gene sequence


Sequence ID>WENV170974147
Genome IDMTKY01054646
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15196
End posion on genome 15285
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgcgtagcct
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTGTGGTCTTTTGGCCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
gagagtcttt
Secondary structure (Cloverleaf model)
>WENV170974147	Ser	CGA
                   t      GCCT gagagtcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGGTCTTTTGGCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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