The detailed information of tRNA gene sequence


Sequence ID>WENV170974156
Genome IDMTKY01054697
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2591
End posion on genome 2501
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccaggttcc
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
gtaacgaaaa
Secondary structure (Cloverleaf model)
>WENV170974156	Ser	GGA
                   c      GCCA gtaacgaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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