The detailed information of tRNA gene sequence


Sequence ID>WENV170974170
Genome IDMTKY01054854
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4736
End posion on genome 4650
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acggacccca
tRNA gene sequence 
GGAGGGGTGCGAGAGCGGTTGAATCGGGCAGTCTCGAAAACTGTTGTGCCTTTCGGGGTA
CCGTGGGTTCGAATCCCACCCCCTCCGttt
Downstream region at tRNA end position 
tgcctgaggt
Secondary structure (Cloverleaf model)
>WENV170974170	Ser	CGA
                   a      Gttt tgcctgaggt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTGCCTTTCGGGGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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