The detailed information of tRNA gene sequence


Sequence ID>WENV170974178
Genome IDMTKY01055024
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2342
End posion on genome 2256
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctcacgacct
tRNA gene sequence 
GCCCAGGTGGTGGAATTGGTAGACGCGCTGGCTTCAGGTGCCAGTGTCCGAAAGGACGTG
GAGGTTCGAGTCCTCTTCTGGGCACCA
Downstream region at tRNA end position 
ttaccctgcg
Secondary structure (Cloverleaf model)
>WENV170974178	Leu	CAG
                   t      ACCA ttaccctgcg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G T G       G G A G G     C
    G         | + |                 T T
    G       A C G C
      T A G        G     TGTCCGAAAGGACGT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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