The detailed information of tRNA gene sequence


Sequence ID>WENV170974181
Genome IDMTKY01055090
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2999
End posion on genome 3096
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcccctgcgt
tRNA gene sequence 
GGGGGTGGTTGAGTCCCGGTGGGCTCCGCGGTCTTCAAAACCGTTTGAGGGGTGCTGCAG
AGGCAGCCTTGGTGGGTTCGACTCCCATCCACTCCCGCtg
Downstream region at tRNA end position 
ccaggtgcga
Secondary structure (Cloverleaf model)
>WENV170974181	SeC(p)	TCA
                   t      GCtg ccaggtgcga
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     TTGAGGGGTGCTGCAGAGGCAGCCTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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