The detailed information of tRNA gene sequence


Sequence ID>WENV170974186
Genome IDMTKY01055265
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8765
End posion on genome 8841
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttaccagcat
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACCGCCTTCGGGAGGCGGGGGTCGAAGGTTCGAA
TCCTTTCACTCCGACCA
Downstream region at tRNA end position 
gtcttgatcg
Secondary structure (Cloverleaf model)
>WENV170974186	Pro	CGG
                   t      ACCA gtcttgatcg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G A A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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