The detailed information of tRNA gene sequence


Sequence ID>WENV170974196
Genome IDMTKY01055395
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9077
End posion on genome 9166
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccattagcc
tRNA gene sequence 
GGAGGGATGGCAGAGCGGACGATTGCGGCGGTCTTGAAAACCGTTGTGGGGGCAACCTCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tcgtcggcat
Secondary structure (Cloverleaf model)
>WENV170974196	Ser	TGA
                   c      GCCA tcgtcggcat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     TGTGGGGGCAACCTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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