The detailed information of tRNA gene sequence


Sequence ID>WENV170974197
Genome IDMTKY01055395
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9180
End posion on genome 9273
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcggcattca
tRNA gene sequence 
GGGGAGATGCCAGAGAGGCCGAATGGAGCCGCCTGCTAAGCGGTTGAGGGGCTTAATCGC
TCCTCCCAGGGTTCGAATCCCTGTCTCCCCGCCT
Downstream region at tRNA end position 
atgccccagt
Secondary structure (Cloverleaf model)
>WENV170974197	Ser	GCT
                   a      GCCT atgccccagt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      A G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        A     TGAGGGGCTTAATCGCTCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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