The detailed information of tRNA gene sequence


Sequence ID>WENV170974217
Genome IDMTKY01055822
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 281
End posion on genome 194
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caatggcctc
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTCGAGTGCGCACGATTGGAAATCGTGTAGGCGCAAGCCTC
GCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ccagctcagg
Secondary structure (Cloverleaf model)
>WENV170974217	Ser	GGA
                   c      GCCA ccagctcagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       G C G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAGGCGCAAGCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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