The detailed information of tRNA gene sequence


Sequence ID>WENV170974225
Genome IDMTKY01055922
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2406
End posion on genome 2330
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccgcgttgc
tRNA gene sequence 
GGAGGCGTGGTGCAGCGGCCTAGCATACCTCCCTGTCAAGGAGGAGATCGCGGGTTCGAA
TCCCGTCGCTTCCGCCA
Downstream region at tRNA end position 
gtcagaacaa
Secondary structure (Cloverleaf model)
>WENV170974225	Asp	GTC
                   c      GCCA gtcagaacaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       C G T G       G C G G G     C
    G       | | | +                 T T
    C       G C A T
      C T A        A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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