The detailed information of tRNA gene sequence


Sequence ID>WENV170974228
Genome IDMTKY01055973
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3491
End posion on genome 3567
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcggcccgt
tRNA gene sequence 
GGCGACGTAGCTCAGTCGGTTAGAGCACAGCATTCATAATGCTGGGGTCGGTGGTTCGAG
CCCACCCGTCGCTACCA
Downstream region at tRNA end position 
tctcctcttc
Secondary structure (Cloverleaf model)
>WENV170974228	Met	CAT
                   t      ACCA tctcctcttc
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          C G
                    T     C C A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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