The detailed information of tRNA gene sequence


Sequence ID>WENV170974243
Genome IDMTKY01056115
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 18543
End posion on genome 18455
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agaatgatgt
tRNA gene sequence 
GCCGAAGTGGTGAAATAGGTAGACGCAGTGGACTCAAAATCCACCGGGCTTCGCAGCCCG
TGCCGGTTCGATTCCGGCCTTCGGCACCA
Downstream region at tRNA end position 
agaaatattt
Secondary structure (Cloverleaf model)
>WENV170974243	Leu	CAA
                   t      ACCA agaaatattt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    A       A G T G       G C C G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGCTTCGCAGCCCGT
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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