The detailed information of tRNA gene sequence


Sequence ID>WENV170974259
Genome IDMTKY01056219
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3943
End posion on genome 4019
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cactggcggc
tRNA gene sequence 
GGCCCCATCGTCTAGCCCGGTTAGGACACAAGGTTTTCATCCTTGTAGCAGGGGTTCAAA
TCCCCTTGGGGTCACCA
Downstream region at tRNA end position 
gcgatacggg
Secondary structure (Cloverleaf model)
>WENV170974259	Glu	TTC
                   c      ACCA gcgatacggg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  C         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          A     TAGC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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