The detailed information of tRNA gene sequence


Sequence ID>WENV170974267
Genome IDMTKY01056382
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1639
End posion on genome 1728
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgacaatcga
tRNA gene sequence 
GGAGAGGTAGCATAGTTTGGCCGAATGCGCACGATTGGAAATCGTGTGAGGGTAACACCT
CCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gggtcgccgg
Secondary structure (Cloverleaf model)
>WENV170974267	Ser	GGA
                   a      GCCA gggtcgccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        A      | | | | |     A
  T         T A C G       G C G G G     C
  G         | | | |                 T T
  G         A T G C
    C C G A        G     TGAGGGTAACACCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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