The detailed information of tRNA gene sequence


Sequence ID>WENV170974285
Genome IDMTKY01056771
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2412
End posion on genome 2337
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cccttcccgt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGCCAGTTCGATC
CTGGTCAGCTCCACCA
Downstream region at tRNA end position 
gcgccgctcc
Secondary structure (Cloverleaf model)
>WENV170974285	Ala	GGC
                   t      ACCA gcgccgctcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T G G T C     A
      T G A        A      + | | | |     G
    T       C T C G       G C C A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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