The detailed information of tRNA gene sequence


Sequence ID>WENV170974293
Genome IDMTKY01057038
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 253
End posion on genome 164
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ctctcagcga
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAAGCGTCGCACTCGAAATGCGAAGTGCCGGCAACGGTA
CCGAGGGTTCGAATCCCTCACTCTCCTCCA
Downstream region at tRNA end position 
tttttttctg
Secondary structure (Cloverleaf model)
>WENV170974293	Ser	CGA
                   a      TCCA tttttttctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     AGTGCCGGCAACGGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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