The detailed information of tRNA gene sequence


Sequence ID>WENV170974329
Genome IDMTKY01057861
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1540
End posion on genome 1630
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagagttct
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGCTTATACCCT
ATCGAGGGTTCGAATCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
attagaaaag
Secondary structure (Cloverleaf model)
>WENV170974329	Ser	GCT
                   t      ACCA attagaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGCTTATACCCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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