The detailed information of tRNA gene sequence


Sequence ID>WENV170974340
Genome IDMTKY01058172
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2595
End posion on genome 2520
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgggaatcc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTTAGAGCAGTCGGCTCATAACCGATTGGTCGCTGGTTCGAAT
CCGGCCGGGCCCACCA
Downstream region at tRNA end position 
tgtatggcgg
Secondary structure (Cloverleaf model)
>WENV170974340	Met	CAT
                   c      ACCA tgtatggcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | | + | |     G
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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