The detailed information of tRNA gene sequence


Sequence ID>WENV170974343
Genome IDMTKY01058296
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4236
End posion on genome 4312
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gccgtcgcgt
tRNA gene sequence 
GGCGGAGTAGCTCAGCCGGCTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCA
Downstream region at tRNA end position 
ttaaaaagcg
Secondary structure (Cloverleaf model)
>WENV170974343	Met	CAT
                   t      ACCA ttaaaaagcg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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