The detailed information of tRNA gene sequence


Sequence ID>WENV170974359
Genome IDMTKY01058606
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 279
End posion on genome 354
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacaaccgt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGTAGGTTCGATT
CCTGCCTGGCCTGCCT
Downstream region at tRNA end position 
gaacgataac
Secondary structure (Cloverleaf model)
>WENV170974359	Trp	CCA
                   t      GCCT gaacgataac
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | + | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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