The detailed information of tRNA gene sequence


Sequence ID>WENV170974360
Genome IDMTKY01058640
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1265
End posion on genome 1189
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acattggatt
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTTAGAGCGTCGGCCTGTCACGCCGAAGGTCGCGGGTTCGAG
CCCCGTCTCTCGCGCCA
Downstream region at tRNA end position 
tccagtctga
Secondary structure (Cloverleaf model)
>WENV170974360	Asp	GTC
                   t      GCCA tccagtctga
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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