The detailed information of tRNA gene sequence


Sequence ID>WENV170974374
Genome IDMTKY01059140
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 433
End posion on genome 358
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttcgaaggg
tRNA gene sequence 
GGGCCTGTAGCTCAATGGTTAGAGCTGGCCGCTCATAACGGCTAGGTTGCGGGTTCGAGT
CCTGCCGGGCCCACCA
Downstream region at tRNA end position 
cttcccgcca
Secondary structure (Cloverleaf model)
>WENV170974374	Met	CAT
                   g      ACCA cttcccgcca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     G
    G       C T C G       G C G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          T     AGGTT
                    G + T
                    G - C
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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