The detailed information of tRNA gene sequence


Sequence ID>WENV170974416
Genome IDMTKY01060709
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2541
End posion on genome 2466
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctttgttccc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCGCCCTTGCAAGGCGGAGGTCGCCGGTTCGATT
CCGGTATCCTCCATCA
Downstream region at tRNA end position 
tcttttccat
Secondary structure (Cloverleaf model)
>WENV170974416	Ala	TGC
                   c      ATCA tcttttccat
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     T G G C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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