The detailed information of tRNA gene sequence


Sequence ID>WENV170974420
Genome IDMTKY01060813
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 907
End posion on genome 832
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agcaattctt
tRNA gene sequence 
GGGGCTGTAGCGCAGGTGGGAGCGCGCTTCCTTGGCATGGAAGAGGCCGCGGGTTCGACT
CCCGCCAGCTCCACCA
Downstream region at tRNA end position 
tgttgtttgc
Secondary structure (Cloverleaf model)
>WENV170974420	Ala	GGC
                   t      ACCA tgttgtttgc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     C G C C C     A
      G G A        A      | | | | |     G
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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