The detailed information of tRNA gene sequence


Sequence ID>WENV170974439
Genome IDMTKY01061312
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 302
End posion on genome 392
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgcacgtgt
tRNA gene sequence 
GGAGAGGTCGCCTAGTCCGGTTTATGGCGCGGGCCTGGAAAGCTCGTAACCCCATAAAGG
TTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
caagcaaaat
Secondary structure (Cloverleaf model)
>WENV170974439	Ser	GGA
                   t      GCCA caagcaaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  C         T C C G       G A G G G     C
  G           | | |                 T T
  G         T G G C
    T T T A        G     TAACCCCATAAAGGTTC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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