The detailed information of tRNA gene sequence


Sequence ID>WENV170974456
Genome IDMTKY01062459
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 424
End posion on genome 519
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcgggtat
tRNA gene sequence 
GGGGGTAGCTGGCGGCCTGGTGGCGCTCCTGGACTTCAAATCCAGTGGTGGGCCTGATAA
GTCCACGGTGGGTTCGATTCCCATCTACTCCCGCCA
Downstream region at tRNA end position 
tgatcggcgg
Secondary structure (Cloverleaf model)
>WENV170974456	SeC(p)	TCA
                   t      GCCA tgatcggcgg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G - C          T T
                    C     T A C C C     A
      C C G        T      + | | | |     G
    T       G C G G       G T G G G     C
    G       | | | +                 T T
    G       C G C T
      T G G        C     TGGTGGGCCTGATAAGTCCACG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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