The detailed information of tRNA gene sequence


Sequence ID>WENV170974478
Genome IDMTKY01063083
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2235
End posion on genome 2160
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgttcctcgc
tRNA gene sequence 
AGGGCTGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGGGTCGGGGGTTCGAGT
CCCTCCAGCCCTGCCA
Downstream region at tRNA end position 
ccgatcatcg
Secondary structure (Cloverleaf model)
>WENV170974478	Trp	CCA
                   c      GCCA ccgatcatcg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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