The detailed information of tRNA gene sequence


Sequence ID>WENV170974516
Genome IDMTKY01064231
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 34131
End posion on genome 34055
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
cctgattgtt
tRNA gene sequence
GGGTGATTAGCTCAGCTGGTTAGAGCGCTACGTTCACATCGTAGAGGTCACTGGTTCGAA
TCCAGTATCACCCACCA
Downstream region at tRNA end position
ctttcccccg
Secondary structure (Cloverleaf model)
>WENV170974516	Val	CAC
                   t      ACCA ctttcccccg
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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