The detailed information of tRNA gene sequence


Sequence ID>WENV170974522
Genome IDMTKY01064501
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5257
End posion on genome 5331
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atgacccgcT
tRNA gene sequence 
GGGCGATTAACTCAGTGGCTAGAGTACTACCTTCACACGGTAGGAGTCGGAGGTTCGAAT
CCTCTATCGCCCATtt
Downstream region at tRNA end position 
ttttcatcga
Secondary structure (Cloverleaf model)
>WENV170974522	Val	CAC
                   T      ATtt ttttcatcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      T G A        A      + | | | |     G
    G       C T C A       G G A G G     C
    G       | | | |                 T T
    C       G A G T
      T A          A     GAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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