The detailed information of tRNA gene sequence


Sequence ID>WENV170974554
Genome IDMTKY01065480
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1572
End posion on genome 1483
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagcatccgc
tRNA gene sequence 
GGATGGGTGGCCGAGCGGTTGAAGGCACCGGTCTTGAAAACCGGCAACGGGGCAACCCGT
TCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
gtcggcgtgc
Secondary structure (Cloverleaf model)
>WENV170974554	Ser	TGA
                   c      GCCA gtcggcgtgc
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CAACGGGGCAACCCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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