The detailed information of tRNA gene sequence


Sequence ID>WENV170974555
Genome IDMTKY01065507
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4225
End posion on genome 4149
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cctcctaggc
tRNA gene sequence 
GGGGCCGTAGTTCAGTTGGTTAGAACGCTGGCCTGTCACGTCAGAGGTCGCGAGTTCAAG
TCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
ctattcctcc
Secondary structure (Cloverleaf model)
>WENV170974555	Asp	GTC
                   c      GCCA ctattcctcc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     A
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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