The detailed information of tRNA gene sequence


Sequence ID>WENV170974566
Genome IDMTKY01065779
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 838
End posion on genome 751
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
caactgattc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTTGATCGGGGCGCTCTCGAAAAGCGTTGTGGCCGAAAGGTCA
CCGTGGGTTCGAATCCCACCCTCTCCGCtg
Downstream region at tRNA end position 
atagtgaagg
Secondary structure (Cloverleaf model)
>WENV170974566	Ser	CGA
                   c      GCtg atagtgaagg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TGTGGCCGAAAGGTCACC
                    G + T
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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