The detailed information of tRNA gene sequence


Sequence ID>WENV170974587
Genome IDMTKY01066458
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1124
End posion on genome 1219
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggtgtcggcc
tRNA gene sequence 
GGAGGTGTCCGGGTACCTGGTGGGCTCCGCCGCCTTCAAAGCGGTTGGGACGAGCGATCC
TCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCT
Downstream region at tRNA end position 
cagcgtctct
Secondary structure (Cloverleaf model)
>WENV170974587	SeC	TCA
                   c      GCCT cagcgtctct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | + |                 T T
    G       G C T C
      T G G        C     TGGGACGAGCGATCCTCGTCCG
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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