The detailed information of tRNA gene sequence


Sequence ID>WENV170974632
Genome IDMTKY01068926
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 389
End posion on genome 478
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcctgttgt
tRNA gene sequence 
GGAGGGGTGACGGAGTGGCCGAACGTGCCGGTCTTGAAAACCGGAGATGGGGTAACCTAT
CCGCGAGTTCAAATCTCGCCCCCTCCGCCA
Downstream region at tRNA end position 
tatttcaata
Secondary structure (Cloverleaf model)
>WENV170974632	Ser	TGA
                   t      GCCA tatttcaata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      T G A        G      | | | | |     A
    G       G G C A       G C G A G     C
    G         | | |                 T T
    C       A C G T
      C G A        G     AGATGGGGTAACCTATCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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