The detailed information of tRNA gene sequence


Sequence ID>WENV170974645
Genome IDMTKY01069898
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1113
End posion on genome 1210
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cctgtcacga
tRNA gene sequence 
GGAAGCGAACGGGGCCCGGTGGCCCTCCCGGTCTTCAAAACCGGTCGCCTCCCGCTGATC
GCGGGAGGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
ctatccggcc
Secondary structure (Cloverleaf model)
>WENV170974645	SeC(p)	TCA
                   a      GCCA ctatccggcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C C        C      | | | | |     G
    G       G G G G       C T G G G     C
    G       | | | +                 T T
    T       C C C T
      G G          C     TCGCCTCCCGCTGATCGCGGGAGGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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