The detailed information of tRNA gene sequence


Sequence ID>WENV170974651
Genome IDMTKY01070238
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2122
End posion on genome 2213
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaagcttgc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGTGATCGCCTGCTAAGCGATTGCGGGCCGAAAGGTC
CGCCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtgttgacaa
Secondary structure (Cloverleaf model)
>WENV170974651	Ser	GCT
                   c      GCCA gtgttgacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    C       A G G T
      T T A        G     TGCGGGCCGAAAGGTCCGCC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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