The detailed information of tRNA gene sequence


Sequence ID>WENV170974656
Genome IDMTKY01070536
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2558
End posion on genome 2482
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcgtgtgtgt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCCGGTAGCGCACTCGCTTGGGGTGCGAGGGGTCGTGGGTTCAAA
TCCCGCCGCCCCGACCA
Downstream region at tRNA end position 
tcggcacgat
Secondary structure (Cloverleaf model)
>WENV170974656	Pro	GGG
                   t      ACCA tcggcacgat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T G G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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