The detailed information of tRNA gene sequence


Sequence ID>WENV170974658
Genome IDMTKY01070538
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 359
End posion on genome 267
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtggtacct
tRNA gene sequence 
GGGGAGATGCCGGAGTGGTCGATCGGGGCCGCCTGCTAAGCGGTTGAGGGGTATTATAGG
CTCCTCCCAGGGTTCGAATCCCTGTCTCCCCGCtg
Downstream region at tRNA end position 
taagtgaata
Secondary structure (Cloverleaf model)
>WENV170974658	Ser	GCT
                   t      GCtg taagtgaata
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    T       T C G G
      C G A        G     TGAGGGGTATTATAGGCTCCTCC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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