The detailed information of tRNA gene sequence


Sequence ID>WENV170974670
Genome IDMTKY01071086
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1810
End posion on genome 1899
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccgttctgc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGTCGCACTCGAAATGCGAAGTACTCGCAAGGGTA
CCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tactttcctt
Secondary structure (Cloverleaf model)
>WENV170974670	Ser	CGA
                   c      GCCA tactttcctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     AGTACTCGCAAGGGTACC
                    T - A
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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