The detailed information of tRNA gene sequence


Sequence ID>WENV170974678
Genome IDMTKY01071669
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8412
End posion on genome 8322
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcaacaccgc
tRNA gene sequence 
GGAGGGATGGCTGAGCGGCTTAAGGCACCCGACTCGAAATCGGACGGGCGTGATGAGCGT
CCCGTGGGTTCAAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170974678	Ser	CGA
                   c      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G T C G       G T G G G     C
    G         + | |                 T T
    C       A G G C
      T T A        A     CGGGCGTGATGAGCGTCCC
                    C   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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